Note: This is the 2011–2012 edition of the eCalendar. Update the year in your browser's URL bar for the most recent version of this page, or click here to jump to the newest eCalendar.
Program Requirements
This program is built on a selection of mathematics and biology courses that recognizes mathematical biology as a field of research, with three streams within biology: Ecology and Evolutionary Ecology, Molecular Evolution, and Neurosciences.Advising notes for U0 students:
It is highly recommended that freshman BIOL, CHEM, MATH, and PHYS courses be selected with the program Adviser to ensure they meet the core requirements of the program.
This program is recommended for U1 students achieving a CGPA of 3.2 or better; and entering CEGEP students with a Math/Science R-score of 28.0 or better.
Required Courses (34 credits)
* If a student has already taken CHEM 212 or its equivalent, the credits can be made up with a complementary course in consultation with the program Adviser.
** Students who have sufficient knowledge in a programming language should take COMP 250 (3) Introduction to Computer Science rather than COMP 202.
*** Students may take either MATH 223 or MATH 247.
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BIOL 200 Molecular Biology (3 credits)
Overview
Biology (Sci) : The physical and chemical properties of the cell and its components in relation to their structure and function. Topics include: protein structure, enzymes and enzyme kinetics; nucleic acid replication, transcription and translation; the genetic code, mutation, recombination, and regulation of gene expression.
Terms: Fall 2011
Instructors: Bureau, Thomas E; Roy, Richard D W; Fagotto, Francesco; Zetka, Monique (Fall)
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BIOL 201 Cell Biology and Metabolism (3 credits)
Overview
Biology (Sci) : This course introduces the student to our modern understanding of cells and how they work. Major topics to be covered include: photosynthesis, energy metabolism and metabolic integration; plasma membrane including secretion, endocytosis and contact mediated interactions between cells; cytoskeleton including cell and organelle movement; the nervous system; hormone signaling; the cell cycle.
Terms: Winter 2012
Instructors: Brouhard, Gary; Roy, Richard D W; Western, Tamara (Winter)
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BIOL 215 Introduction to Ecology and Evolution (3 credits)
Overview
Biology (Sci) : An introduction to the fundamental processes of ecology and evolution that bear on the nature and diversity of organisms and the processes that govern their assembly into ecological communities and their roles in ecosystem function.
Terms: Fall 2011
Instructors: Price, Neil; Potvin, Catherine; Abouheif, Ehab (Fall)
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CHEM 212 Introductory Organic Chemistry 1 (4 credits) *
Overview
Chemistry : A survey of reactions of aliphatic and aromatic compounds including modern concepts of bonding, mechanisms, conformational analysis, and stereochemistry.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: Daoust, Michel; Sewall, Samuel Lewis; Gauthier, Jean-Marc; Tsantrizos, Youla S (Fall) Harpp, David Noble; Schirrmacher, Ralf; Daoust, Michel; Sewall, Samuel Lewis; Gauthier, Jean-Marc (Winter) Fenster, Ariel; Daoust, Michel (Summer)
Fall, Winter, Summer
Prerequisite: CHEM 110 or equivalent.
Corequisite: CHEM 120 or equivalent.
Restriction: Not open to students who are taking or have taken CHEM 211 or equivalent
Each lab section is limited enrolment
Note: Some CEGEP programs provide equivalency for this course. For more information, please see the Department of Chemistry's Web page ().
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COMP 202 Foundations of Programming (3 credits) **
Overview
Computer Science (Sci) : Introduction to programming in a modern high-level language, modular software design and debugging. Programming concepts are illustrated using a variety of application areas.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: Pomerantz, Daniel; Kienzle, Jorg Andreas (Fall) Pomerantz, Daniel; Liu, Xue (Winter) Pomerantz, Daniel (Summer)
3 hours
Prerequisite: a CEGEP level mathematics course
Restrictions: COMP 202 and COMP 208 cannot both be taken for credit. COMP 202 is intended as a general introductory course, while COMP 208 is intended for students interested in scientific computation. COMP 202 cannot be taken for credit with or after COMP 250
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MATH 222 Calculus 3 (3 credits)
Overview
Mathematics & Statistics (Sci) : Taylor series, Taylor's theorem in one and several variables. Review of vector geometry. Partial differentiation, directional derivative. Extreme of functions of 2 or 3 variables. Parametric curves and arc length. Polar and spherical coordinates. Multiple integrals.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: Loveys, James G; Rogers, Mathew (Fall) Loveys, James G (Winter) Fraiman, Nicolás (Summer)
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MATH 223 Linear Algebra (3 credits) ***
Overview
Mathematics & Statistics (Sci) : Review of matrix algebra, determinants and systems of linear equations. Vector spaces, linear operators and their matrix representations, orthogonality. Eigenvalues and eigenvectors, diagonalization of Hermitian matrices. Applications.
Terms: Fall 2011, Winter 2012
Instructors: Jonsson, Wilbur (Fall) Jonsson, Wilbur (Winter)
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MATH 242 Analysis 1 (3 credits)
Overview
Mathematics & Statistics (Sci) : A rigorous presentation of sequences and of real numbers and basic properties of continuous and differentiable functions on the real line.
Terms: Fall 2011
Instructors: Dimitrov, Nikolay; Klemes, Ivo (Fall)
Fall
Prerequisite: MATH 141
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MATH 243 Analysis 2 (3 credits)
Overview
Mathematics & Statistics (Sci) : Infinite series; series of functions; power series. The Riemann integral in one variable. A rigorous development of the elementary functions.
Terms: Winter 2012
Instructors: Klemes, Ivo (Winter)
Winter
Prerequisite: MATH 242
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MATH 247 Honours Applied Linear Algebra (3 credits) ***
Overview
Mathematics & Statistics (Sci) : Matrix algebra, determinants, systems of linear equations. Abstract vector spaces, inner product spaces, Fourier series. Linear transformations and their matrix representations. Eigenvalues and eigenvectors, diagonalizable and defective matrices, positive definite and semidefinite matrices. Quadratic and Hermitian forms, generalized eigenvalue problems, simultaneous reduction of quadratic forms. Applications.
Terms: Winter 2012
Instructors: Hundemer, Axel W (Winter)
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MATH 315 Ordinary Differential Equations (3 credits)
Overview
Mathematics & Statistics (Sci) : First order ordinary differential equations including elementary numerical methods. Linear differential equations. Laplace transforms. Series solutions.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: Xu, Jian-Jun (Fall) Xu, Jian-Jun (Winter) Eswarathasan, Suresh (Summer)
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MATH 323 Probability (3 credits)
Overview
Mathematics & Statistics (Sci) : Sample space, events, conditional probability, independence of events, Bayes' Theorem. Basic combinatorial probability, random variables, discrete and continuous univariate and multivariate distributions. Independence of random variables. Inequalities, weak law of large numbers, central limit theorem.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: Anderson, William J (Fall) Wolfson, David B (Winter) Kelome, Djivede (Summer)
Complementary Courses (42 credits)
For the 42 credits, students complete 24 credits of BINF, BIOL, NEUR, PHGY, PSYC courses including one of three Streams (Ecology and Evolutionary Ecology, Molecular Evolution, Neurosciences) and 18 credits of MATH courses.
Math or Biology Research Course
Note: Students selecting a BIOL course count this toward their 24 credits of BINF, BIOL, NEUR, PHGY, PSYC courses while students selecting a MATH course count this toward their 18 credits of MATH courses.
3 credits from the following Math or Biology Research courses:
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BIOL 466 Independent Research Project 1 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 477.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
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BIOL 467 Independent Research Project 2 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 478.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
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MATH 410 Majors Project (3 credits)
Overview
Mathematics & Statistics (Sci) : A supervised project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: Kelome, Djivede; Neslehova, Johanna; Kamran, Niky (Fall) Kelome, Djivede (Winter) Kelome, Djivede (Summer)
Prerequisite: Students must have 21 completed credits of the required mathematics courses in their program, including all required 200 level mathematics courses.
Requires departmental approval.
Of the remaining complementary courses, at least 6 credits must be at the 400 level or above.
Math Courses
15-18 credits of MATH courses chosen from Sequence 1 or 2 and from "Remaining Math Courses" as follows:
Sequence 1
12 credits from the following courses:
* Students may take either MATH 317 or MATH 327
** Students may take either MATH 326 or MATH 437
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MATH 314 Advanced Calculus (3 credits)
Overview
Mathematics & Statistics (Sci) : Derivative as a matrix. Chain rule. Implicit functions. Constrained maxima and minima. Jacobians. Multiple integration. Line and surface integrals. Theorems of Green, Stokes and Gauss.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: Jonsson, Wilbur (Fall) Klemes, Ivo (Winter) Roth, Charles (Summer)
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MATH 317 Numerical Analysis (3 credits) *
Overview
Mathematics & Statistics (Sci) : Error analysis. Numerical solutions of equations by iteration. Interpolation. Numerical differentiation and integration. Introduction to numerical solutions of differential equations.
Terms: Fall 2011
Instructors: Bartello, Peter (Fall)
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MATH 319 Introduction to Partial Differential Equations (3 credits)
Overview
Mathematics & Statistics (Sci) : First order equations, geometric theory; second order equations, classification; Laplace, wave and heat equations, Sturm-Liouville theory, Fourier series, boundary and initial value problems.
Terms: Winter 2012
Instructors: Tsogtgerel, Gantumur (Winter)
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MATH 326 Nonlinear Dynamics and Chaos (3 credits) **
Overview
Mathematics & Statistics (Sci) : Linear systems of differential equations, linear stability theory. Nonlinear systems: existence and uniqueness, numerical methods, one and two dimensional flows, phase space, limit cycles, Poincare-Bendixson theorem, bifurcations, Hopf bifurcation, the Lorenz equations and chaos.
Terms: Fall 2011
Instructors: Calleja Castillo, Renato (Fall)
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MATH 327 Matrix Numerical Analysis (3 credits) *
Overview
Mathematics & Statistics (Sci) : An overview of numerical methods for linear algebra applications and their analysis. Problem classes include linear systems, least squares problems and eigenvalue problems.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
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MATH 437 Mathematical Methods in Biology (3 credits) **
Overview
Mathematics & Statistics (Sci) : The formulation and treatment of realistic mathematical models describing biological phenomena through qualitative and quantitative mathematical techniques (e.g. local and global stability theory, bifurcation analysis and phase plane analysis) and numerical simulation. Concrete and detailed examples will be drawn from molecular and cellular biology and mammalian physiology.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
Sequence 2
9 credits from the following:
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MATH 324 Statistics (3 credits)
Overview
Mathematics & Statistics (Sci) : Sampling distributions, point and interval estimation, hypothesis testing, analysis of variance, contingency tables, nonparametric inference, regression, Bayesian inference.
Terms: Fall 2011, Winter 2012
Instructors: Steele, Russell (Fall) Anderson, William J (Winter)
Fall and Winter
Prerequisite: MATH 323 or equivalent
Restriction: Not open to students who have taken or are taking MATH 357
You may not be able to receive credit for this course and other statistic courses. Be sure to check the Course Overlap section under Faculty Degree Requirements in the Arts or Science section of the Calendar.
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MATH 423 Regression and Analysis of Variance (3 credits)
Overview
Mathematics & Statistics (Sci) : Least-squares estimators and their properties. Analysis of variance. Linear models with general covariance. Multivariate normal and chi-squared distributions; quadratic forms. General linear hypothesis: F-test and t-test. Prediction and confidence intervals. Transformations and residual plot. Balanced designs.
Terms: Fall 2011
Instructors: Khalili Mahmoudabadi, Abbas (Fall)
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MATH 447 Introduction to Stochastic Processes (3 credits)
Overview
Mathematics & Statistics (Sci) : Conditional probability and conditional expectation, generating functions. Branching processes and random walk. Markov chains, transition matrices, classification of states, ergodic theorem, examples. Birth and death processes, queueing theory.
Terms: Winter 2012
Instructors: Anderson, William J (Winter)
Remaining Math Courses
Remaining 3-9 credits of MATH courses may be chosen from any of the two preceding sequences and/or from the following list:
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MATH 204 Principles of Statistics 2 (3 credits)
Overview
Mathematics & Statistics (Sci) : The concept of degrees of freedom and the analysis of variability. Planning of experiments. Experimental designs. Polynomial and multiple regressions. Statistical computer packages (no previous computing experience is needed). General statistical procedures requiring few assumptions about the probability model.
Terms: Winter 2012
Instructors: Steele, Russell (Winter)
Winter
Prerequisite: MATH 203 or equivalent. No calculus prerequisites
Restriction: This course is intended for students in all disciplines. For extensive course restrictions covering statistics courses see Section 3.6.1 of the Arts and of the Science sections of the calendar regarding course overlaps.
You may not be able to receive credit for this course and other statistic courses. Be sure to check the Course Overlap section under Faculty Degree Requirements in the Arts or Science section of the Calendar.
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MATH 340 Discrete Structures 2 (3 credits)
Overview
Mathematics & Statistics (Sci) : Review of mathematical writing, proof techniques, graph theory and counting. Mathematical logic. Graph connectivity, planar graphs and colouring. Probability and graphs. Introductory group theory, isomorphisms and automorphisms of graphs. Enumeration and listing.
Terms: Winter 2012
Instructors: Vetta, Adrian Roshan (Winter)
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MATH 523 Generalized Linear Models (4 credits)
Overview
Mathematics & Statistics (Sci) : Modern discrete data analysis. Exponential families, orthogonality, link functions. Inference and model selection using analysis of deviance. Shrinkage (Bayesian, frequentist viewpoints). Smoothing. Residuals. Quasi-likelihood. Sliced inverse regression. Contingency tables: logistic regression, log-linear models. Censored data. Applications to current problems in medicine, biological and physical sciences. GLIM, S, software.
Terms: Winter 2012
Instructors: Stephens, David (Winter)
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MATH 524 Nonparametric Statistics (4 credits)
Overview
Mathematics & Statistics (Sci) : Distribution free procedures for 2-sample problem: Wilcoxon rank sum, Siegel-Tukey, Smirnov tests. Shift model: power and estimation. Single sample procedures: Sign, Wilcoxon signed rank tests. Nonparametric ANOVA: Kruskal-Wallis, Friedman tests. Association: Spearman's rank correlation, Kendall's tau. Goodness of fit: Pearson's chi-square, likelihood ratio, Kolmogorov-Smirnov tests. Statistical software packages used.
Terms: Fall 2011
Instructors: Genest, Christian (Fall)
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MATH 525 Sampling Theory and Applications (4 credits)
Overview
Mathematics & Statistics (Sci) : Simple random sampling, domains, ratio and regression estimators, superpopulation models, stratified sampling, optimal stratification, cluster sampling, sampling with unequal probabilities, multistage sampling, complex surveys, nonresponse.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
BIOL, NEUR, PHGY, PHYS, PSYC Courses
21-24 credits of BIOL, NEUR, PHGY, PHYS, PSYC courses including one of three Streams.
Note: Some courses in the Streams may have prerequisites.
Ecology and Evolutionary Ecology Stream
At least 15 credits selected as follows:
Stream Required Course
3 credits of:
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BIOL 206 Methods in Biology of Organisms (3 credits)
Overview
Biology (Sci) : Introduction to modern methods used in organismal biology, including ecological sampling, experimental methods and statistics, taxonomic and phylogenetic analysis of biodiversity, experimental behavioural ecology, microbiological methods, and library search procedures.
Terms: Fall 2011
Instructors: Gonzalez, Andrew; Chapman, Lauren; Lefebvre, Louis (Fall)
Fall
1.5 hours lecture, 3.5 hours laboratory and local field trip in week 2
Prerequisite: BIOL 111 or equivalent
Stream Complementary Courses
3 credits from the following field courses or any other field course with permission:
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BIOL 240 Monteregian Flora (3 credits)
Overview
Biology (Sci) : Field studies of ferns, fern allies, conifers and flowering plants; the use of keys for plant identification.
Terms: Summer 2012
Instructors: Lapointe, Melanie; Lechowicz, Martin J (Summer)
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BIOL 331 Ecology/Behaviour Field Course (3 credits)
Overview
Biology (Sci) : Methods of sampling natural populations. Testing hypotheses in nature.
Terms: Fall 2011
Instructors: Chapman, Lauren; Reader, Simon; Schoen, Daniel J (Fall)
Fall
Note: Preregistration in March and April. See Course web page: . Meets 12-days just before the fall term, with a project report early in the fall term.
The field portion of this course is given at the University's Gault Nature Reserve in Mont St. Hilaire over a two-week period in August. In the fall, students prepare a report based on projects carried out during this field portion. This course has an additional fee of $532 which includes room and board and handouts. The Department of Biology subsidizes a portion of the cost for this activity
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BIOL 334D1 Applied Tropical Ecology (1.5 credits)
Overview
Biology (Sci) : Relevant to agriculture, forestry, fisheries and conservation of natural resources. Field component taught at the University's Bellairs Research Institute in Barbados, for two weeks in early May. The course is organized in a series of small-group field projects of 2-3 days each. Interested students should check the course website, attend the full information session and fill out an application form.
Terms: Winter 2012
Instructors: Bureau, Thomas E; Price, Neil; Guichard, Frederic (Winter)
Winter, Summer
Prerequisites: BIOL 206; and BIOL 215 or both ENVR 200 and ENVR 202; and permission of the instructor.
Students must register for both BIOL 334D1 and BIOL 334D2.
No credit will be given for this course unless both BIOL 334D1 and BIOL 334D2 are successfully completed in consecutive terms
BIOL 334D1 and BIOL 334D2 together are equivalent to BIOL 334
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BIOL 334D2 Applied Tropical Ecology (1.5 credits)
Overview
Biology (Sci) : Relevant to agriculture, forestry, fisheries and conservation of natural resources. Field component taught at the University's Bellairs Research Institute in Barbados, for two weeks in early May. The course is organized in a series of small-group field projects of 2-3 days each. Interested students should check the course website, attend the full information session and fill out an application form.
Terms: Summer 2012
Instructors: Guichard, Frederic; Bureau, Thomas E; Price, Neil (Summer)
Winter, Summer
Prerequisites: BIOL 206; and BIOL 215 or both ENVR 200 and ENVR 202; and permission of the instructor.
Students must register for both BIOL 334D1 and BIOL 334D2.
No credit will be given for this course unless both BIOL 334D1 and BIOL 334D2 are successfully completed in consecutive terms
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BIOL 432 Limnology (3 credits)
Overview
Biology (Sci) : A study of the physical, chemical and biological properties of lakes and other inland waters, with emphasis on their functioning as systems.
Terms: Fall 2011
Instructors: Fussmann, Gregor; Gregory-Eaves, Irene (Fall)
Fall
2 hours lecture; 2 weekends at field station equivalent to 3 hours laboratory per week
Prerequisites: BIOL 206 and BIOL 215 or permission of instructor.
This course, involving two field weekends, has an additional fee of $225, which includes room and board and transportation. The fee is refundable during the period where a student can drop the course with full refund. The Department of Biology subsidizes a portion of the cost for this activity.
At least 9 credits chosen from the following list, of which 6 credits must be at the 400 level or above:
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BIOL 202 Basic Genetics (3 credits)
Overview
Biology (Sci) : Introduction to basic principles, and to modern advances, problems and applications in the genetics of higher and lower organisms with examples representative of the biological sciences.
Terms: Winter 2012, Summer 2012
Instructors: Western, Tamara; Chevrette, Mario; Hendry, Andrew (Winter) Dankort, David; Hipfner, David (Summer)
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BIOL 304 Evolution (3 credits)
Overview
Biology (Sci) : This course will show how the theory of evolution by natural selection provides the basis for understanding the whole of biology. The first half of the course describes the process of selection, while the second deals with evolution in the long term.
Terms: Fall 2011
Instructors: Bell, Graham (Fall)
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BIOL 308 Ecological Dynamics (3 credits)
Overview
Biology (Sci) : Principles of population, community, and ecosystem dynamics: population growth and regulation, species interactions, dynamics of competitive interactions and of predator/prey systems; evolutionary dynamics.
Terms: Fall 2011
Instructors: Guichard, Frederic; Fussmann, Gregor (Fall)
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BIOL 310 Biodiversity and Ecosystems (3 credits)
Overview
Biology (Sci) : Ecological bases of the natural causes and consequences of current global environmental changes, including how biodiversity and ecosystem processes are defined and measured, how they vary in space and time, how they are affected by physical and biological factors, and how they affect each other and human societies.
Terms: Winter 2012
Instructors: Davies, Thomas (Winter)
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BIOL 324 Ecological Genetics (3 credits)
Overview
Biology (Sci) : This course presents evolutionary genetics within an ecological context. The course covers theoretical topics together with relevant data from natural populations of plants and animals.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall
- 2 hours lecture, 1 hour seminar
- Prerequisite: BIOL 202
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BIOL 434 Theoretical Ecology (3 credits)
Overview
Biology (Sci) : Study of theoretical ecology and of mathematical tools available to explore the dynamical behaviour of model populations, communities and ecosystems. Models addressing major ecological theories including population stability, community dynamics and ecosystem functioning, epidemic and disturbance dynamics, spatial models, game theory.
Terms: Winter 2012
Instructors: Guichard, Frederic (Winter)
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BIOL 435 Natural Selection (3 credits)
Overview
Biology (Sci) : Explains how the selection of undirected variation accounts for some of the leading features of the natural world. Its main focus is evolutionary change and adaptation, but it will also include material from ecological, economic, biochemical and computer systems. It emphasizes experimental studies of evolution.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall
- 3 hours of lecture
- Prerequisite: BIOL 304 or permission of instructor.
-
BIOL 466 Independent Research Project 1 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 477.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
-
BIOL 467 Independent Research Project 2 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 478.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
-
BIOL 468 Independent Research Project 3 (6 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course
- Restriction: Open only to Biology students. Not open to students who have taken BIOL 471 or BIOL 471D1/D2.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
-
BIOL 585 Game Theory and Evolutionary Dynamics (3 credits)
Overview
Biology (Sci) : Mathematical models of game theory and evolutionary dynamics; classical models and current research.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
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BIOL 590 Linking Community and Ecosystem Ecology (3 credits)
Overview
Biology (Sci) : Theoretical foundations for a new ecological synthesis that merges the perspectives of population, community, evolutionary and ecosystem ecology. Focus on theory in interaction with experimental and empirical work, and covers current topics at the interface between community and ecosystem ecology.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Winter
- 1.5 hours lecture, 1.5 hours seminar
- Prerequisite: BIOL 434 or permission of instructor.
-
BIOL 594 Advanced Evolutionary Ecology (3 credits)
Overview
Biology (Sci) : Evolutionary ecology is the study of evolutionary change in natural populations. General predictive approaches in evolutionary ecology, including population genetics, quantitative genetics, optimality, and game theory will be examined. Emphasis will be placed on the mathematical underpinnings of each approach, particularly as they relate to classic and contemporary problems.
Terms: Fall 2011
Instructors: Hendry, Andrew (Fall)
Molecular Evolution Stream
At least 16 credits selected as follows:
Stream Required Courses
7 credits from:
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BIOL 202 Basic Genetics (3 credits)
Overview
Biology (Sci) : Introduction to basic principles, and to modern advances, problems and applications in the genetics of higher and lower organisms with examples representative of the biological sciences.
Terms: Winter 2012, Summer 2012
Instructors: Western, Tamara; Chevrette, Mario; Hendry, Andrew (Winter) Dankort, David; Hipfner, David (Summer)
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BIOL 301 Cell and Molecular Laboratory (4 credits)
Overview
Biology (Sci) : An introduction to laboratory techniques with a focus on methods used to investigate fundamental questions in modern cell and molecular biology. Techniques including gene cloning, DNA and protein isolation and manipulation are covered, along with functional analysis of genes and proteins, basic bioinformatics, and computer-based experimental design and data analysis.
Terms: Fall 2011, Winter 2012
Instructors: Moon, Nam Sung; Dent, Joseph Alan; Zheng, Huanquan (Fall) Moon, Nam Sung; Harrison, Paul; Zheng, Huanquan (Winter)
Fall or Winter
1 hour lecture and one 6-hour laboratory
Prerequisites: PHYS 102 or PHYS 142, BIOL 200, BIOL 201 or ANAT/BIOC 212, and BIOL 202. BIOL 206 recommended.
Restrictions: Not open to students who have taken or are taking BIOC 300. Requires departmental approval.
For approval email anne-marie.sdicu [at] mcgill.ca. Specify your ID number as well as the term and lab day.
Stream Complementary Courses
At least 9 credits selected from the following list, of which 6 credits must be at the 400 level or above.
* Students may take either BINF 511 or BIOL 592.
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BINF 511 Bioinformatics for Genomics (3 credits) *
Overview
Bioinformatics : Bioinformatics methods and reasoning in relation to genomics, proteomics and metabolomics strategies with an emphasis on functional genomics data. The course will cover introduction to UNIX, Perl programming, data processing and integration, file parsing, relational database design and implementation, angled towards solutions relevant for genomics.
Terms: Winter 2012
Instructors: Stromvik, Martina (Winter)
Prerequisite: Understanding of cell and molecular biology (equivalent to a cell or molecular biology course) or permission from instructor.
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BIOL 303 Developmental Biology (3 credits)
Overview
Biology (Sci) : A consideration of the fundamental processes and principles operating during embryogenesis. Experimental analyses at the molecular, cellular, and organismal levels will be presented and discussed to provide an overall appreciation of developmental phenomena.
Terms: Winter 2012
Instructors: Nilson, Laura; Rao, Yong; Dufort, Daniel (Winter)
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BIOL 304 Evolution (3 credits)
Overview
Biology (Sci) : This course will show how the theory of evolution by natural selection provides the basis for understanding the whole of biology. The first half of the course describes the process of selection, while the second deals with evolution in the long term.
Terms: Fall 2011
Instructors: Bell, Graham (Fall)
-
BIOL 435 Natural Selection (3 credits)
Overview
Biology (Sci) : Explains how the selection of undirected variation accounts for some of the leading features of the natural world. Its main focus is evolutionary change and adaptation, but it will also include material from ecological, economic, biochemical and computer systems. It emphasizes experimental studies of evolution.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall
- 3 hours of lecture
- Prerequisite: BIOL 304 or permission of instructor.
-
BIOL 466 Independent Research Project 1 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 477.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
-
BIOL 467 Independent Research Project 2 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 478.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
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BIOL 468 Independent Research Project 3 (6 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course
- Restriction: Open only to Biology students. Not open to students who have taken BIOL 471 or BIOL 471D1/D2.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
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BIOL 518 Advanced Topics in Cell Biology (3 credits)
Overview
Biology (Sci) : Concepts and mechanisms in advanced cell biology, based on genetic, cell biological, biophysical, and computational studies. Emphasis is placed on processes that are evolutionarily conserved, with examples from model organisms and cell-free (in vitro) approaches.
Terms: Winter 2012
Instructors: Brouhard, Gary; Vogel, Jacalyn (Winter)
Winter
3 hours seminar
Prerequisite: BIOL 313 or permission
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BIOL 569 Developmental Evolution (3 credits)
Overview
Biology (Sci) : The influence of developmental mechanisms on evolution. This course draws on recent examples from plants and invertebrate and vertebrate animals. Topics include homology, modularity, dissociation, co-option, evolutionary novelty, evolution of cis-regulation and gene regulatory networks, developmental constraint and evolvability, heterochrony, phenotypic plasticity, and canalization.
Terms: Winter 2012
Instructors: Larsson, Hans Carl; Abouheif, Ehab (Winter)
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BIOL 572 Molecular Evolution (3 credits)
Overview
Biology (Sci) : Evolutionary change in DNA and proteins and its implications for cellular, organismal, and population/species evolution.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall
- 3 hours lecture/seminar
- Prerequisite: BIOL 300
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BIOL 592 Integrated Bioinformatics (3 credits) *
Overview
Biology (Sci) : 'Post-genomic' bioinformatics. Concepts behind large-scale computational analysis and comparison of genomes/proteomes (and beyond), and the implications for our understanding of the basic processes of molecular and cell biology and the evolution of those processes.
Terms: This course is not scheduled for the 2011-2012 academic year.
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
Neurosciences Stream
At least 15 credits selected as follows:
Stream Required Course
3 credits from:
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BIOL 306 Neural Basis of Behaviour (3 credits)
Overview
Biology (Sci) : Neural mechanisms of animal behaviour; neuroethology; cellular neurophysiology, integrative networks within nervous systems; neural control of movement; processing of sensory information.
Terms: Fall 2011
Instructors: Pollack, Gerald; Dent, Joseph Alan; Krahe, Rudiger (Fall)
Stream Complementary Courses
At least 12 credits selected from:
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BIOL 389 Laboratory in Neurobiology (3 credits)
Overview
Biology (Sci) : Methods of neurobiological research, including extracellular and intracellular recordings, electrical stimulation, and the study of neuro-behavioural problems.
Terms: Winter 2012
Instructors: Krahe, Rudiger; Dent, Joseph Alan; Pollack, Gerald (Winter)
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BIOL 466 Independent Research Project 1 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 477.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
-
BIOL 467 Independent Research Project 2 (3 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course.
- Restrictions: Open only to Biology students. Not open to students who have taken BIOL 478.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
-
BIOL 468 Independent Research Project 3 (6 credits)
Overview
Biology (Sci) : Independent research project.
Terms: Fall 2011, Winter 2012, Summer 2012
Instructors: There are no professors associated with this course for the 2011-2012 academic year.
- Fall, Winter or Summer
- Prerequisite: BIOL 206 or BIOL 301 or other suitable laboratory course
- Restriction: Open only to Biology students. Not open to students who have taken BIOL 471 or BIOL 471D1/D2.
- Projects must be arranged individually with a staff member of the Biology Department and a form from Nancy Nelson, Room W3/25, Stewart Building, must be completed prior to registration.
- BIOL 530 Advances in Neuroethology (3 credits)
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PHGY 314 Integrative Neuroscience (3 credits)
Overview
Physiology : In depth presentation of experimental results and hypotheses underlying our current understanding of how single neurons and ensembles of neurons encode sensory information, generate movement, and control cognitive functions such as emotion, learning, and memory, during voluntary behaviours.
Terms: Fall 2011
Instructors: Cullen, Kathleen E; Martinez Trujillo, Julio; Pack, Christopher (Fall)
Fall
3 hours of lectures per week
Prerequisites: PHGY 209
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PHGY 425 Analyzing Physiological Systems (3 credits)
Overview
Physiology : An introduction to quantitative analysis of physiological data, both to the mode of thinking and to a set of tools that allows accurate predictions of biological systems. Examples will range from oscillating genetic networks to understanding higher brain function. Modelling and data analysis through examples and exercises will be emphasized.
Terms: Fall 2011
Instructors: Cook, Erik; Glavinovic, Mladen I; Chacron, Maurice (Fall)
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PSYC 427 Sensorimotor Behaviour (3 credits)
Overview
Psychology : A systematic examination of the sensorimotor system, drawing on models and data from both behavioural and physiological studies. Topics include: cortical motor areas, cerebellum, basal ganglia, spinal mechanisms, motor unit properties and force production, prioception, muscle properties.
Terms: Winter 2012
Instructors: Ostry, David J (Winter)
Winter
2 lectures
Prerequisite: PSYC 308 or permission of instructor
Remaining BINF, BIOL, NEUR, PHGY, PSYC
For the remaining BINF, BIOL, NEUR, PHGY, PSYC complementary course credits, if any, students top up their credits to the necessary 24 with any course listed in the above streams in Biology or any other course in Biology with the approval of the program Adviser.
Faculty of Science—2011-2012 (last updated Jan. 26, 2012) (disclaimer)